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1 to 10 of 26 Results
A Cdx4-Sall4 regulatory module controls the transition from mesoderm formation to embryonic hematopoiesis
Oct 30, 2020 - Zon Lab
Paik, Elizabeth J.; Mahony, Shaun; White, Richard M.; Price, Emily N.; DiBiase, Anthony; Dorjsuren, Bilguujin; Mosimann, Christian; Davidson, Alan J.; Gifford, David; Zon, Leonard I., 2020, "A Cdx4-Sall4 regulatory module controls the transition from mesoderm formation to embryonic hematopoiesis", https://doi.org/10.7910/DVN/0XYJJW, Harvard Dataverse, V1
Deletion of caudal/cdx genes alters hox gene expression and causes defects in posterior tissues and hematopoiesis. Yet, the defects in hox gene expression only partially explain these phenotypes. To gain deeper insight into Cdx4 function, we performed ChIP-seq combined with gene...
a_15621.txt
Oct 30, 2020 - ChIP-seq analysis of chromatin state plasticity in primary human adult erythroid progenitor cells
Plain Text - 2.6 KB - MD5: cbd7837b8da6960e2af8cb2e96307533
Assay metadata
a_15880.txt
Oct 30, 2020 - Histone Demethylase Lsd1 is Required to Repress Hematopoietic Stem and Progenitor Cell Signatures During Blood Cell Maturation
Plain Text - 5.6 KB - MD5: b7d4c660e900938f1304b9e842009733
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a_16032.txt
Oct 30, 2020 - Identification of genes regulated by Rcor1 in CD71+, TER119- erythroid progenitors using mRNA-seq analysis
Plain Text - 1.8 KB - MD5: 4dfa890307228cae5cf6fea8ef4c854c
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a_16131.txt
Oct 30, 2020 - A Cdx4-Sall4 regulatory module controls the transition from mesoderm formation to embryonic hematopoiesis
Plain Text - 3.7 KB - MD5: ffa68dc867f4d3ae669d81897879ce5b
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a_16243.txt
Oct 30, 2020 - Comparative profiling of chromatin state maps and transcription factor occupancy during human fetal and adult erythropoiesis [Transcription Factor Binding]
Plain Text - 6.5 KB - MD5: d619c693310b170d3844919fbbe09ff7
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a_16244.txt
Oct 30, 2020 - Comparative profiling of chromatin state maps and transcription factor occupancy during human fetal and adult erythropoiesis [Histone Modification]
Plain Text - 7.1 KB - MD5: 0fab5ec25c796afbdc3ff92611379654
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ChIP-seq analysis of chromatin state plasticity in primary human adult erythroid progenitor cells
Oct 30, 2020 - Orkin Lab
Pinello, Luca; Xu, Jian; Orkin, Stuart H.; Yuan, Guo-Cheng, 2020, "ChIP-seq analysis of chromatin state plasticity in primary human adult erythroid progenitor cells", https://doi.org/10.7910/DVN/FFPCJX, Harvard Dataverse, V1
We report a computational approach for investigation of chromatin state plasticity. We applied this approach to investigate an ENCODE ChIP-seq dataset profiling the genome-wide distribution of H3K27me3 in 19 human cell lines. We found that high plasticity regions (HPRs) can be di...
Comparative profiling of chromatin state maps and transcription factor occupancy during human fetal and adult erythropoiesis [Histone Modification]
Oct 30, 2020 - Orkin Lab
Xu, Jian; Zhen, Shao; Glass, Kimberly; Bauer, Daniel E.; Pinello, Luca; Van Handel, Ben; Hou, Serena; Stamatoyannopoulos, John A.; Mikkola, Hanna K.A.; Yuan, Guo-Cheng; Orkin, Stuart H., 2020, "Comparative profiling of chromatin state maps and transcription factor occupancy during human fetal and adult erythropoiesis [Histone Modification]", https://doi.org/10.7910/DVN/Z6OX6R, Harvard Dataverse, V1
Gene-distal enhancers are critical for tissue-specific gene expression, but their genomic determinants within a specific lineage at different stages of development are unknown. Here we profile chromatin state maps, transcription factor occupancy, and gene expression profiles duri...
Comparative profiling of chromatin state maps and transcription factor occupancy during human fetal and adult erythropoiesis [Transcription Factor Binding]
Oct 30, 2020 - Orkin Lab
Xu, Jian; Zhen, Shao; Glass, Kimberly; Bauer, Daniel E.; Pinello, Luca; Van Handel, Ben; Hou, Serena; Stamatoyannopoulos, John A.; Mikkola, Hanna K.A.; Yuan, Guo-Cheng; Orkin, Stuart H., 2020, "Comparative profiling of chromatin state maps and transcription factor occupancy during human fetal and adult erythropoiesis [Transcription Factor Binding]", https://doi.org/10.7910/DVN/P75S6Z, Harvard Dataverse, V1
Gene-distal enhancers are critical for tissue-specific gene expression, but their genomic determinants within a specific lineage at different stages of development are unknown. Here we profile chromatin state maps, transcription factor occupancy, and gene expression profiles duri...
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